CDS

Accession Number TCMCG017C21320
gbkey CDS
Protein Id OMO81415.1
Location join(88565..88706,88787..88923,89603..89859,91063..91159,91267..91512,91683..92304,92422..92672)
GeneID InterPro:IPR011990
Organism Corchorus olitorius
locus_tag COLO4_23602

Protein

Length 583aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01018284.1
Definition Tetratricopeptide-like helical [Corchorus olitorius]
Locus_tag COLO4_23602

EGGNOG-MAPPER Annotation

COG_category U
Description Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane
KEGG_TC 3.A.5.9
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko02044        [VIEW IN KEGG]
KEGG_ko ko:K03108        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03060        [VIEW IN KEGG]
map03060        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005047        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005786        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006605        [VIEW IN EMBL-EBI]
GO:0006612        [VIEW IN EMBL-EBI]
GO:0006613        [VIEW IN EMBL-EBI]
GO:0006614        [VIEW IN EMBL-EBI]
GO:0006616        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008312        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0019904        [VIEW IN EMBL-EBI]
GO:0030911        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042493        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043021        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0045047        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048500        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0065002        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070972        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071806        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0072599        [VIEW IN EMBL-EBI]
GO:0072657        [VIEW IN EMBL-EBI]
GO:0090150        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTCCGAAGGCCAAAGATAAGCCAAAGGCGGCTCCATCGCCGTCGCAGCCTCCTCCATCAATCGAAGATCTCTTCACTTCTCTCAACAAGCACATCCAACGATCTGAATTCACGCTGGCCGTCAAAGTTGCAAATCAAGTTCTGTCAGTTGAGCCTAGAGATGAGGAAGCCATTAGATGCAAAGTGGTGGCTTTGATGAAAGACGATAAGATTGAGGAGGCTCTGTCAGCAATTCAGGCTGCTCCGAAGGTTTCCTTTGATTTCAGTGTTTACAAGGTTCTATATCGTCTAGGAAAAATGGATGCTTGTGTTGATATCTACCGTAACCTTCAAAGAGCAAAGGTTGATCTCTCGGAAATAAATTTGGTTGCTGGTTTGGTTTCAGCTGGAAGGGCTTCTGAAGTTCAAGGAACTTTGGACAGCCTTAGGGTTAAGGCCACGAGCAGCTTTGAGTTGGCATATAATGTTGCTTGTTCTTTAATTGAAGGAAACAAGCATAAGGATGCTGAACAACTGCTGCTCGCAGCACGAAGAATTGGTCAGGAGACACTGACGGAGGAGAACTATGCTGATGACGATATAGAGATTGAACTAGCTCCAATTTCTGTCCAGTTAGCTTATGTTCAACAGCTCCTTGGTCACTCACAAGAGGCTCTTGGAGCTTATACAGATATCGTAAACCGAAATCTGGCAGATGAACTATCACTGGCAGTGGCAGTGAACAACCTTATTGCAGTGAAAGGTCCAAAAGACATATCTGACAGCTTAAGGAAACTTGATCGGCTTAAAGAGAAAGATTCACAGAAGTTTCAGCTTGAACAGTCTATTGACTTGAAGCTTTCACCTAAACAAAAGGAGACAATATATGCAACTAGAGCTCGGGAAATTGTTGCTATTTTGCCTGAGCTGTTTCCTGACAGTGTGTTGCCAGTACTGCTTCAAGCTGCTGTCTTGGTGAGAGAAAACAAGGCAGGGAAGGCTGAAGAATTGTTGGGTCAATTTGCTGAGAAATTCCCTGAAAAATCAAAGGTCATTTTCTTAGCAAGGGCACAAGTAGCTGCTGCTGCTGGCCACCACCAAATTGCAGCTGAATCCCTTTCCAAAGTGCCTGATATCCAGCACATGCCGGCCACTGTTGCCACTCTTGTTGCTCTAAAAGAACGTGCTGGAGACATAAATGGTGCAGCTGATGTGCTTGACTCTGCAATCAAATGGTGGAAAACTGCTATGACTGAGGATGACCACCTCAGTGTTATAATGCAAGAGGCTGCTTCCTTCAAGCTCAGGCATGGCAAAGAAGAGGAAGCTGCCCATCTTTATGAGGAGCTTGTGAAAAGTCATGGAAGCATAGAGGCATTAGTTGGGCTGATAACTACCGTTGCTCATGTGAATGTTGACAAGGCTGAAGCTTATGAGAAGCAACTGAAGCCATTACCTGGTTTGAAAGGTGTTGATGTGGATGGTTTGGAGAAAACTTCTGGGGCAAAACATATTGAAGGTCCTCCACCAGATCCAGAAAGATGGCTCCCCAAGAGAGAAAGGTCAAGTTACAGACCCAAGAGAAAGGATAAGAGAGCAGCTCAGGTCAGAGGCTCTCAGGGTGCAGTTGTTAGAGAAAAGAGTGAAGCTAGTGCCTCAGCCACCAGTTCTAACACTTCTAACGCAAAACCAAACCAAGCTACAAGTTCCAAAAATGCCGAGCAATCCAGACCTCAGTCTAAGTCGTCAAGAAAGAAGTCGAGAAATTAA
Protein:  
MAPKAKDKPKAAPSPSQPPPSIEDLFTSLNKHIQRSEFTLAVKVANQVLSVEPRDEEAIRCKVVALMKDDKIEEALSAIQAAPKVSFDFSVYKVLYRLGKMDACVDIYRNLQRAKVDLSEINLVAGLVSAGRASEVQGTLDSLRVKATSSFELAYNVACSLIEGNKHKDAEQLLLAARRIGQETLTEENYADDDIEIELAPISVQLAYVQQLLGHSQEALGAYTDIVNRNLADELSLAVAVNNLIAVKGPKDISDSLRKLDRLKEKDSQKFQLEQSIDLKLSPKQKETIYATRAREIVAILPELFPDSVLPVLLQAAVLVRENKAGKAEELLGQFAEKFPEKSKVIFLARAQVAAAAGHHQIAAESLSKVPDIQHMPATVATLVALKERAGDINGAADVLDSAIKWWKTAMTEDDHLSVIMQEAASFKLRHGKEEEAAHLYEELVKSHGSIEALVGLITTVAHVNVDKAEAYEKQLKPLPGLKGVDVDGLEKTSGAKHIEGPPPDPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVVREKSEASASATSSNTSNAKPNQATSSKNAEQSRPQSKSSRKKSRN